The JaSaD leader and freedom fighter died at 78 on Friday
Five activists of the party's student front were arrested following the clash at the city's Rajarhata area, said police.
Boyalia Police Station OC Abdus Sobhan said that the incident happened around 8.30 am in front of the Rajarhata Loknath School.
Jamaat supporters took out a procession from the Sonadighi Moni Chattar area demanding acquittal of their senior leader and war crimes convict Delwar Hossain Sayedee.